PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86408.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 289aa    MW: 30784.6 Da    PI: 7.8856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19138188255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  OWM86408.1 138 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAYRMRG 188
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MYADSIQGSD LAVLGSAHRH LMGEPEFSAR SSGAFGAPIF CRSSSFGKLY PCLTENWGEL  60
PLKEDDPEDM VLYGVLRDAV HVGWVPTLSG SSGSCQMGFG SDVSVKPEPY TLPEPTATPA  120
PEMKVAPVAA AAVPKGRHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTYE TAEDAALAYD  180
RAAYRMRGSK ALLNFPLRIN SGEPDPVRVT SKRSSPEPDN SSSPSSSFSS DNGSPKRRRK  240
VVGPAAPATA QVGSETVVGN ASGPQQVQLQ VEPQVATCIR GEHLLISGC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235241PKRRRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-63ERF family protein