PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85952.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 749aa MW: 81255.2 Da PI: 5.7636

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.2	6.1e-32	313	370	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ ++++ ei+Y+g+Hnh+k OWM85952.1 313 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHISEIIYKGTHNHPK 370 8**************************************.*************85 PP
2	WRKY	103.1	1.5e-32	517	575	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+++d k v++tYeg+Hnh+ OWM85952.1 517 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHD 575 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MSGMDDNVVI IEEWVPPSPS PRTFFSAMLG DDIGSRSIPD PPSQNETEGF VMGPKDKSVV 60 GNSDKKGTTS MDHFAEFGSF SELRSAPRGG LGDRIAARAG FNAPKLNTEG IRPNDVLNPE 120 ARSPFLMLSP GLSPTTLLES PVFLSNSLAE PSPTTGKFPF LPNGSNRSSR LVSDCPDKIK 180 ENSLFEDNDS SSFAFRPGAE LSPSFFGSEP KVTPTFPQQS FQRMEVSAQS NTSFQLHNAE 240 QPKLQPQADF SSLLMEKDAG NNNNGAVPSD QRMSDNTVVG ADHSSPLDEP QDEEGDQKAN 300 GDSAIGGGGS PSDDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCQVKKKVE RSHEGHISEI 360 IYKGTHNHPK PPPSRRGVIG GSDIPEQVGA QGGTEADQGW GNNVPKTSTP EWRQDNFEVT 420 SSPSEGPEFC NPNTGLPAQN GAQFEPGEAV DASSTFSNEY EDDQANGSIS LGYDAEEDES 480 ESKRRKIEAY PADMSGATRA IREPRVVVQT TSEVDILDDG YRWRKYGQKV VKGNPNPRSY 540 YKCTSTGCTV RKHVERASHD LKSVITTYEG KHNHDVPAAR NSSHGNSGPG SAQPIASGVQ 600 AHVHRPEPAQ AHNGIPRFDS SGPLPSFGLP GRPHLPPHGF SFGLNAPTGL ENLTMAGLGA 660 AHGKMAMLPI HPFLAAQQQQ QQQQQQQQQQ QQQQQHQHQH RQVSEMGFML PKGEPKPEPV 720 SDTGFNLSNN SAAAVYQQFM STLPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MSGMDDNVVI IEEWVPPSPS PRTFFSAMLG DDIGSRSIPD PPSQNETEGF VMGPKDKSVV  60
GNSDKKGTTS MDHFAEFGSF SELRSAPRGG LGDRIAARAG FNAPKLNTEG IRPNDVLNPE  120
ARSPFLMLSP GLSPTTLLES PVFLSNSLAE PSPTTGKFPF LPNGSNRSSR LVSDCPDKIK  180
ENSLFEDNDS SSFAFRPGAE LSPSFFGSEP KVTPTFPQQS FQRMEVSAQS NTSFQLHNAE  240
QPKLQPQADF SSLLMEKDAG NNNNGAVPSD QRMSDNTVVG ADHSSPLDEP QDEEGDQKAN  300
GDSAIGGGGS PSDDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCQVKKKVE RSHEGHISEI  360
IYKGTHNHPK PPPSRRGVIG GSDIPEQVGA QGGTEADQGW GNNVPKTSTP EWRQDNFEVT  420
SSPSEGPEFC NPNTGLPAQN GAQFEPGEAV DASSTFSNEY EDDQANGSIS LGYDAEEDES  480
ESKRRKIEAY PADMSGATRA IREPRVVVQT TSEVDILDDG YRWRKYGQKV VKGNPNPRSY  540
YKCTSTGCTV RKHVERASHD LKSVITTYEG KHNHDVPAAR NSSHGNSGPG SAQPIASGVQ  600
AHVHRPEPAQ AHNGIPRFDS SGPLPSFGLP GRPHLPPHGF SFGLNAPTGL ENLTMAGLGA  660
AHGKMAMLPI HPFLAAQQQQ QQQQQQQQQQ QQQQQHQHQH RQVSEMGFML PKGEPKPEPV  720
SDTGFNLSNN SAAAVYQQFM STLPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-171	WRKY family protein