PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM85799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | NF-YB | ||||||||
Protein Properties | Length: 192aa MW: 20350.6 Da PI: 6.0225 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 186.6 | 1.8e-58 | 30 | 125 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfedyveplkvyl+++relegek OWM85799.1 30 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLHRFRELEGEK 125 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MVDTDSESPP QGSRGGGENS GGAGDLSSPR EQDRFLPIAN VSRIMKKALP ANAKISKDAK 60 ETVQECVSEF ISFVTGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP LKVYLHRFRE 120 LEGEKTGRDR DGGGGGGDGE SVGGVAGSGT GGYGMVMMMG QAQQHQGHVY GSGVFHHQMG 180 LGGPGSALTR PR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47640.1 | 3e-64 | NF-YB family protein |