PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85175.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 467aa MW: 51201.9 Da PI: 7.8298

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.3	3.2e-14	292	338	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+++N++f Lr+++Pk K++Ka+ L Av YIk+L OWM85175.1 292 QNHVEAERQRREKLNQRFYALRSVVPKV-----SKMDKASLLSDAVTYIKEL 338 689**********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MMEEIEITSP VTSGPVDSSL ALQQKLSLLI QTRPEWWAYS IFWQAVRERA TGRVLLTWRD 60 GHFRGPRDRP PSFPPRSRKP TAIDGFLVDG HTCDSEWHYM VSVTKSYPAS SDGGALGGAF 120 SSGAYLWLSG GSELRLGECD RIREARAHGI ETVACISVPG GVVELGSLDV IKEDWGLVQM 180 TKSLFSSNPC SDSHANKSVH VITHGVGGSS NLFGNDLSGK IFSGSCQEEE VMGIEEKPAY 240 GKKTAAAGTT SSDSGRSDSD GNIASTNTGM TTPTGNKKRG RKSLSERESP PQNHVEAERQ 300 RREKLNQRFY ALRSVVPKVS KMDKASLLSD AVTYIKELRS KIDELESCLR SKPSQHPLQQ 360 RNMPLSVGVH HVRPNGLNGP YYGTRGRMEV EVKVVGTEAM VRVQGPDTDH PAARLMQALK 420 ELQLHVQHAS INSVKALVLQ DVVVQIPEGC TSEEFMKDAI LEKLYQC

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MMEEIEITSP VTSGPVDSSL ALQQKLSLLI QTRPEWWAYS IFWQAVRERA TGRVLLTWRD  60
GHFRGPRDRP PSFPPRSRKP TAIDGFLVDG HTCDSEWHYM VSVTKSYPAS SDGGALGGAF  120
SSGAYLWLSG GSELRLGECD RIREARAHGI ETVACISVPG GVVELGSLDV IKEDWGLVQM  180
TKSLFSSNPC SDSHANKSVH VITHGVGGSS NLFGNDLSGK IFSGSCQEEE VMGIEEKPAY  240
GKKTAAAGTT SSDSGRSDSD GNIASTNTGM TTPTGNKKRG RKSLSERESP PQNHVEAERQ  300
RREKLNQRFY ALRSVVPKVS KMDKASLLSD AVTYIKELRS KIDELESCLR SKPSQHPLQQ  360
RNMPLSVGVH HVRPNGLNGP YYGTRGRMEV EVKVVGTEAM VRVQGPDTDH PAARLMQALK  420
ELQLHVQHAS INSVKALVLQ DVVVQIPEGC TSEEFMKDAI LEKLYQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	5e-51	bHLH family protein