PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85036.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 463aa    MW: 48762.6 Da    PI: 6.5361
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-20224273255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  OWM85036.1 224 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 273
                 8********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MCCSIKVAGQ RRTSSSSDDF PFPSYFPPHE SPSGSGQGPD SALPAAQQQP PPQEVGAAAV  60
AFGREAEMSE MVSALRHVVS AGQRGGGGTG WDSAAASDVF GSVLIGTESN STMFSFASSS  120
PSPSTSHPFS AYSNTGVLGR SYSVPVVGQK RVREDRETSS SVRLIDFGGS RVESPSTVSA  180
AEEATATAPP PASATPTGAT TPSTPSGEST SFEESPGGGE QKRKYRGVRQ RPWGKWAAEI  240
RDPHKAARVW LGTFDTAEAA ARAYDEAALR FRGNRAKLNF PEIVRQNVNA VPQRARPELT  300
AVSSASVVSG PLGLQMAMPQ PPVPSSDQYG DYWEYSRLLR GQPSGLLDQM LGSYNTPQQA  360
SSIQSPSLYT SPPSWAPPPP QRPPILQEPP PSSMPSSTSF TSFTDSSLSV SFPLLYSGQQ  420
LGYFPQQPAG NQSRVGGNSI IGGSNFPESW STSGQYPPPS TSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-22ERF family protein