PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM84985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | GRAS | ||||||||
Protein Properties | Length: 602aa MW: 65604 Da PI: 4.7979 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 452.6 | 2.5e-138 | 228 | 591 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv++L++cAeav++++l+la++l++ + la +++ +m+++a++f+eALa+r+++ +y p+++ + +s + + f+e++P+lkf+h+taN OWM84985.1 228 LVHTLMACAEAVQQENLKLAEELVKYVGLLAVSQAGAMRKVATCFAEALARRIYK----IY----PQDSLDATSYNDILE-MHFYETCPYLKFAHFTAN 317 689***************************************************9....55....444443344444444.35**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaIlea+ +++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ va++l+dle+ +L+++p OWM84985.1 318 QAILEAFGTASRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQIGWKLAQLAETIGVEFEFRGYVATSLADLEPAMLDLRP 416 *********************************************************************************9999************** PP GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295 Ea+aVn+v++lhrll++++++e+ vL+ + ++Pk++++veqea+hn++ Fl+rf+eal+yys+lfdsle + + ++++ +++ ++lgr+i+ OWM84985.1 417 peVEAVAVNSVFELHRLLARPGAIEK----VLNSIEAMKPKIITIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSGRTLENQDLVMSDVYLGRQIC 511 9999**********************....***********************************************977778**************** PP GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 nvvaceg +r+erhetl++Wr+r+++aGF pvpl+++a kqa +ll ++ ++gyrvee++g+l+lgW++rpL+++SaWr OWM84985.1 512 NVVACEGPDRFERHETLAQWRSRMGSAGFDPVPLGSNAFKQAGMLLDLFSgGEGYRVEENNGCLMLGWHTRPLIATSAWR 591 *******************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 602 aa Download sequence |
MKKRHHQDSC SSSYGGAGSS SSAGKAKAWE EEQDPTGGMD ELLAVLGYKV RSSDMADVAL 60 KLEQLEMVMG QEDSVSFSHL QNDTVHYNPS DLSSWVQTML SELNAPIPDQ VQPLHTDLDF 120 SGLQNRFGAS ESTQPQLGFS DDSEYDLSAI PGVAAYPPPP PPPQRPAPQQ LQQQPEPARG 180 KRMKTSIGPS NPNLNLSSSS SSSSSAVGAP ESTRPVVLVD SQEAGVRLVH TLMACAEAVQ 240 QENLKLAEEL VKYVGLLAVS QAGAMRKVAT CFAEALARRI YKIYPQDSLD ATSYNDILEM 300 HFYETCPYLK FAHFTANQAI LEAFGTASRV HVIDFSLKQG MQWPALMQAL ALRPGGPPAF 360 RLTGIGPPQP DNTDALQQIG WKLAQLAETI GVEFEFRGYV ATSLADLEPA MLDLRPPEVE 420 AVAVNSVFEL HRLLARPGAI EKVLNSIEAM KPKIITIVEQ EANHNGPVFL DRFTEALHYY 480 SSLFDSLEGS GRTLENQDLV MSDVYLGRQI CNVVACEGPD RFERHETLAQ WRSRMGSAGF 540 DPVPLGSNAF KQAGMLLDLF SGGEGYRVEE NNGCLMLGWH TRPLIATSAW RLAPTVAPTG 600 AQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 0.0 | GRAS family protein |