PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM84980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 31743.7 Da PI: 4.951 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ G +W++ ++ g+ R++k+c++rw +yl OWM84980.1 14 KGPWTAEEDKKLINFMLTNGQCCWRALPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.6e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++l +d+++qlG++ W++Ia++++ gRt++++k++w+++ OWM84980.1 70 LSESEEKLVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 5899***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MGRQPCCDKV GLKKGPWTAE EDKKLINFML TNGQCCWRAL PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SESEEKLVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG 120 IDPVTHKPIT SPDPTDDQTK EQNQPNEQFA PASSSMSPNK SLVSAITEET KEDRVDRTTL 180 STSNKICTDD IPLIDPSEIL VQPRSSSSAS STSSSSSSDS ILQDLDFPSM DWSCDNNVNL 240 ISLLEDDFKW EDLLIDDDGN SNMITIDPID DQASQDWAYG LLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 4e-94 | MYB family protein |