PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84885.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 333aa MW: 37658.4 Da PI: 8.4199

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H OWM84885.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16.7	2.1e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H OWM84885.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	20.9	9.5e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk Fs nL++H++tH OWM84885.1 136 FICPheGCGKAFSLDFNLRSHMKTH 160 78**********************9 PP
4	zf-C2H2	17.5	1.1e-05	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi H OWM84885.1 166 HICPypDCGKRYAHEYKLKNHIAAH 190 679999****************995 PP
5	zf-C2H2	14	0.00014	229	254	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H OWM84885.1 229 YACPyeGCEKAYIHEYKLKLHLRReH 254 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
METHFSHNIF ERRPIIKART PAVKWFREWV PQDVVATGGK CSLLRWITED GLRDLGEKEN 60 EPKEPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFICPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIAAH HERSAPVDLP KYTPPVEKPP KVSKPSSGAY GSASSDRPYA CPYEGCEKAY 240 IHEYKLKLHL RREHPGHMAE ENPEGTPAAH NPDHDMDEAS DQETYIAKRA SNGKNPKQSR 300 AKSRAKVAPA KATKRKASSP TPTPVAVVSC SDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-138	C2H2 family protein