PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM84522.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 27615.6 Da PI: 4.5627 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g OWM84522.1 42 TYRGVRMRT-WGKWVSEIREPRK---KSRIWLGTFSTAEMAARAHDVAALAIKG 91 69****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 258 aa Download sequence |
MAETPNSEAE SSTDAVPRPM GDANPTRKRG REGMGSGTKH PTYRGVRMRT WGKWVSEIRE 60 PRKKSRIWLG TFSTAEMAAR AHDVAALAIK GPSAILNFPD LAPSLPKPAS SAPCDVQAAA 120 TIAASMEHLL PPRSPTPSAP AAAEPCPSTS SSNSTSAAAS SSSSSSESMW PGGDASTPEQ 180 ELGEIVELPS LGTCFFETAE TRSEFVLVDL FDRWVDPLEW YGPDDPRSGY FISDDHQITS 240 MQEESAVTGG FEASLWEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-43 | ERF family protein |