PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM84114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 28890.9 Da PI: 7.8357 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.6 | 6.6e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk+ G g W ++ ++ g++R++k+c++rw++yl OWM84114.1 16 KGAWTVIEDYILIDYVKRNGEGKWGRVVKETGLRRCGKSCRLRWLNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 6e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++ +k++w+++l OWM84114.1 69 RGNISDDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNKIKNYWNTVL 114 7899******************.*********.************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGRNPSPTLL KDGLNKGAWT VIEDYILIDY VKRNGEGKWG RVVKETGLRR CGKSCRLRWL 60 NYLRPDIKRG NISDDEEELI IRLHKLLGNR WSLIAGRLPG RTDNKIKNYW NTVLKKKSKL 120 GGEQPKNHKP INDITVKYQC NEVLEAIAHE DHPLDQTTAA SAVLPKASTA NTTILQAEGQ 180 VILPMAVENI NDCCPWDFTA VEHKLGEVFM SEFVDLFTIA ANDLYPQNNG RPGECENVFD 240 VKRSVHSSSD DLVAGPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-56 | MYB family protein |