PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM84110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 263aa MW: 29739.6 Da PI: 6.3013 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.6e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d vk G g+W+++++ g++R++k+c++rw++yl OWM84110.1 16 KGAWTATEDQILIDFVKNNGEGRWERVSKQTGLRRCGKSCRLRWLNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.8 | 2.1e-17 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia++++ gRt++++k++w++ OWM84110.1 69 RGNISEDEEELIIRLHKLLGNR-WSLIAKRLP-GRTDNEIKNYWNSI 113 7899******************.*********.***********975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 263 aa Download sequence |
MRRNPSPTRS KEELSKGAWT ATEDQILIDF VKNNGEGRWE RVSKQTGLRR CGKSCRLRWL 60 NYLRPDIKRG NISEDEEELI IRLHKLLGNR WSLIAKRLPG RTDNEIKNYW NSILRKKLQL 120 GGKQSEYRNP KKNIATKDPC NEVSPTMANV QGPPVDHSLT AASLDEPEGS MANATVPEAK 180 GPTTLQVAGD EKDGCPSDFM VNHKLCTEIC PSDDFMELCT QIGPKESENR FDQMSLPSSS 240 NNLQDSELSE EMLFKWAADL MDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G40330.1 | 5e-57 | MYB family protein |