PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83938.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 334aa    MW: 36933.2 Da    PI: 6.6827
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.84e-083584154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+i   +++ +k+L
  OWM83938.1 35 RKTQKADREKLRRDRLNEQFVELGNALDPD----RPKNDKATIIADTIQLLKDL 84
                6788999********************997....79**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MKPEIPPPPP RDPHAPPLGS PSQPNSSQRN ENAARKTQKA DREKLRRDRL NEQFVELGNA  60
LDPDRPKNDK ATIIADTIQL LKDLTAEVNK LKTEYAALTE ESRELTQEKN DLKDEKASLK  120
SEIDNLNIQC QHRSRAMFPW GPMDPSVVMG PTGPASYPFP VPMAVPSGPI PMHPSIPPYT  180
FFASPNPNII PNSCSTFVPY ITPSTQVEQL SAQYVSPLMQ RGNASHVSSN VDNKNKSSGE  240
GKSRKSDDSN EVTTDLELKT PWSTADHDSC SEQRKSKRSL TRDDSGERSA SSSYICITES  300
WVVGRDLSSF SKKGKEPVDT SSLEVLNWTR SMGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274315RKSKRSLTRDDSGERSASSSYICITESWVVGRDLSSFSKKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-87bHLH family protein