PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83919.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family BBR-BPC
Protein Properties Length: 278aa    MW: 31078.1 Da    PI: 9.4299
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind302.22e-921327819301
   GAGA_bind  19 slkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsep 117
                   +  ++++ ms++ erd++irern+a++e+k+a+ +rd+a +qrd+a+aer++al+ rdn+  al + en+++    + + + sg k ++s+q     
  OWM83919.1  13 DTNAVQNKRFMSIMIERDNAIRERNAAIAETKEALIARDEAIKQRDEAIAERDRALMMRDNAREALRHLENAIN----SPQFAASGMKRAHSHQS---- 103
                 444567999***********************************************************999844....44567788888887777.... PP

   GAGA_bind 118 qledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCt 216
                        +  e ++++a+p+++ + ea +++ ++k+++  ++++k  + +k  +e s+  ++++   ++ ++e+++ d++ln + +Des++P PvCsCt
  OWM83919.1 104 -------DNGEARITDAFPLSSITAEAVKSSCQSKENSIGSTRKKGGETTKA-GEGSNYYSAASA-ARKFRSEWDDHDVGLNLIVFDESAMPGPVCSCT 193
                 .......345677889999999999998888888777777666655555444.666655555555.479****************************** PP

   GAGA_bind 217 GalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 G  + CYkWGnGGWqS+CCtt iS+yPLP+++++r+aR++grKmS+++f++lL ++a+ G+dls pvDLkd+WA+HGtn+++ti+
  OWM83919.1 194 GEAHPCYKWGNGGWQSSCCTTMISMYPLPQMPNKRHARMSGRKMSGSVFTRLLTRMAKAGHDLSIPVDLKDYWARHGTNRYITIK 278
                 ************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MQWNVMLQHH PKDTNAVQNK RFMSIMIERD NAIRERNAAI AETKEALIAR DEAIKQRDEA  60
IAERDRALMM RDNAREALRH LENAINSPQF AASGMKRAHS HQSDNGEARI TDAFPLSSIT  120
AEAVKSSCQS KENSIGSTRK KGGETTKAGE GSNYYSAASA ARKFRSEWDD HDVGLNLIVF  180
DESAMPGPVC SCTGEAHPCY KWGNGGWQSS CCTTMISMYP LPQMPNKRHA RMSGRKMSGS  240
VFTRLLTRMA KAGHDLSIPV DLKDYWARHG TNRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-104BBR-BPC family protein