PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83723.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 240aa    MW: 26259.9 Da    PI: 5.1802
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.81e-21108157255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    r +r++lg+fgtaeeAa+a+++a+ +++g
  OWM83723.1 108 HYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFGTAEEAARAYDRAAIEFRG 157
                 69*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MPQRPKHPAA PSSSSSQSPM PPPPSTDHEL SVMVAALTNI VSGTASSSST SAAAGALPPS  60
ETCRQCGIDG CLGCSFFVPN SANASQQDAE GRRNQSTSSR RSRTKKFHYR GVRQRPWGKW  120
AAEIRDPRRA ARVWLGTFGT AEEAARAYDR AAIEFRGPRA KLNFPFLDYT SPTPTEGESL  180
LSEMERPESS GTNGEVSAEL VEQGNFGESH NFWEFLGDDE MREMMTLMDF REEDSSDSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.15e-32ERF family protein