PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83591.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 439aa MW: 49142.4 Da PI: 5.0841

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.2e-09	239	285	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h ++ R+++N++f+ L +l+P++ K + a+++ +A+eYIk+L OWM83591.1 239 TKHFTTDKEKRSQMNDKFAILMSLIPNP-----IKTDRASVVGEAIEYIKEL 285 78999999*****************9.....69*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MYVETDPDCF DPNDPYSIGE VADCLGFPQA LQDPHESSTF EQTMGLHEDV HSNMENCYEN 60 NENDTHLMQG MIHDGAATNH LDNQALALGN HQAPIDNNWS YAAQNFDNGP PIMLPDGQIP 120 MIAPTLDLLD LFHNLPPRSS AALLQNQPIP SLIEPIPMGV YDPLLHLAPH PPPPLMRDLF 180 HSLPHGCYRG TSSLFGDGGD DDGGLLYHQN HHQETENGML KFSQDINVCL GNGRERKATK 240 HFTTDKEKRS QMNDKFAILM SLIPNPIKTD RASVVGEAIE YIKELLRTVD ELKLLVEKKR 300 CGMGSRRKRH RMEDGDMESC ITDKPISEPD QSYSSALRSS WLQRKSKVTE VDVRIIDDEV 360 TIKLVQRKKI NCLLYVSRVL DELHLDLQHV AGGHIGEHYS FLFNSKIYEG SPVFASAIAS 420 KLIEAVDGQY AMSCPTGSY

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MYVETDPDCF DPNDPYSIGE VADCLGFPQA LQDPHESSTF EQTMGLHEDV HSNMENCYEN  60
NENDTHLMQG MIHDGAATNH LDNQALALGN HQAPIDNNWS YAAQNFDNGP PIMLPDGQIP  120
MIAPTLDLLD LFHNLPPRSS AALLQNQPIP SLIEPIPMGV YDPLLHLAPH PPPPLMRDLF  180
HSLPHGCYRG TSSLFGDGGD DDGGLLYHQN HHQETENGML KFSQDINVCL GNGRERKATK  240
HFTTDKEKRS QMNDKFAILM SLIPNPIKTD RASVVGEAIE YIKELLRTVD ELKLLVEKKR  300
CGMGSRRKRH RMEDGDMESC ITDKPISEPD QSYSSALRSS WLQRKSKVTE VDVRIIDDEV  360
TIKLVQRKKI NCLLYVSRVL DELHLDLQHV AGGHIGEHYS FLFNSKIYEG SPVFASAIAS  420
KLIEAVDGQY AMSCPTGSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	2e-78	bHLH family protein