PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83541.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 427aa MW: 45905.6 Da PI: 5.2107

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.9	1.2e-05	316	353	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L OWM83541.1 316 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 353 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MAEEFINQVG VCSGNWWNPS RNALFAGGLS LCSGAAGDVA SYGWPVEPNF SSMTSSSSVN 60 SDWTQALLFG GGANNGIRTP SESNFNSNNI MHESGSSDSS QINNDWSPGL PGNFSGKPVE 120 DHEDSSPMSG FRNQISFPTQ SSENYANHDI SSSCGYPSNM IKSFLLDQAQ PSLFENRPNL 180 SAAGYSSPLV PSYGSSCSDE SSPASFGKLS SLLTPINSSL PNPPQPSRLQ FSNNTPYWNA 240 SFSALDDVCA GLFASPQSTL AGGSLDEKPD HSSLTPKATS QYSRVSGSLD KKASPEPAFK 300 RARIETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA SVLHEAIEYI KFLHDQVNVL 360 SSPYMKNGAQ PQYQQACTDN KAPKDAEGPK IDLRSRGLCL VPISSTFPVT SETPTDFWNP 420 TFGRSFR

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MAEEFINQVG VCSGNWWNPS RNALFAGGLS LCSGAAGDVA SYGWPVEPNF SSMTSSSSVN  60
SDWTQALLFG GGANNGIRTP SESNFNSNNI MHESGSSDSS QINNDWSPGL PGNFSGKPVE  120
DHEDSSPMSG FRNQISFPTQ SSENYANHDI SSSCGYPSNM IKSFLLDQAQ PSLFENRPNL  180
SAAGYSSPLV PSYGSSCSDE SSPASFGKLS SLLTPINSSL PNPPQPSRLQ FSNNTPYWNA  240
SFSALDDVCA GLFASPQSTL AGGSLDEKPD HSSLTPKATS QYSRVSGSLD KKASPEPAFK  300
RARIETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA SVLHEAIEYI KFLHDQVNVL  360
SSPYMKNGAQ PQYQQACTDN KAPKDAEGPK IDLRSRGLCL VPISSTFPVT SETPTDFWNP  420
TFGRSFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	2e-53	bHLH family protein