PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM83163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | GATA | ||||||||
Protein Properties | Length: 193aa MW: 20961.8 Da PI: 10.7719 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.4 | 1.1e-19 | 53 | 86 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk + OWM83163.1 53 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 86 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MMSSNQAGGN RVAVNSAHKF EDQKKIPSPP AVESDTSTKG SSYRNTDSTV RVCSDCNTTK 60 TPLWRSGPRG PKSLCNACGI RQRKARRALA AAAAAVANGT INPPATPSIK IKVKSKTKRQ 120 KNDSSNGPQF KKGCKNKLPR NSSPTKKINN FCYEDFTSRI LSKHYSAYQG VFPQDEREAA 180 ILLMALSYGL VHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 3e-32 | GATA family protein |