PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82829.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 384aa    MW: 41339.9 Da    PI: 6.3849
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17273307135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  OWM82829.1 273 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 307
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MEAPDQFFHG GYCAAAAQLT PQNCHHLSSL ENKDVQHFAV EDLLDFSKDD VGAVGGVVRG  60
LDSAAGGSST DSSTLTVVDS CNSASFSGCD PGLAAAATAT GGGGGGDIGC CAGFADNDQF  120
SNELCVPYDD LAELEWLSNI VEESFSSEDL QKLQLISGIK ARPDEGSETT APEFQPELAR  180
PHHHGKTINS PIFHSDVSFP AKARSKRSRS APCNWASRLL ILSEPTNDAS STEPDRPAPM  240
SPQPAAGKKN SQACPKKKPM GPEGIPNGEG RKCLHCATDK TPQWRTGPMG PKTLCNACGV  300
RYKSGRLVPE YRPAASPTFV LTKHSNSHRK VLELRRQKDL LRSQQLQQHH QQFSLQGQNT  360
VFDITNSDDY LIHQNVGPDF RQLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.16e-92GATA family protein