PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82375.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NF-YB

Protein Properties

Length: 1769aa MW: 196121 Da PI: 6.2558

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.5	5.3e-55	26	119	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++yre + OWM82375.1 26 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLSRYREGD 119 59*****************************************************************************************966 PP

Sequence ? help Back to Top
Protein Sequence Length: 1769 aa Download sequence
MAEAPASPGG GGSHDESGDH SPRSHVREQD RYLPIANISR IMKKALPANG KIAKDAKETV 60 QECVSEFISF ITSEASDKCQ REKRKTINGD DLLWAMATLG FEDYIDPLKV YLSRYREGDT 120 KGSAKVGEGS ARKDGVALHH GANAQKLSAE KAGERRRRRR RADEKLTSPL SSIRIPISRL 180 KSSSTASETD YRHTQSEIET DNYINLGSIC SETLPRKKSH TGSSMESRGQ KRADVVDELP 240 ADKRACNLVE FRPSSSNSSA QTQVKSTNSP LHSQEADMET SSTASASSRS EGEPDRDSAY 300 GSCDSDDLDP RYSSLRDYHR RRSFGENSKF KTILSSLSSE KEPSALVAAL TELCEVLSFC 360 TEDSPSSMLA DSFSPILVKL ARHNSNPDIM LLAIRAITYL CDVFPRSSGF LVRHDAIHAL 420 CEKLMAIEYM DVAEQAPLEK ISRDQPLACL QAGAIGAVLN LIDFLSTSMQ RVALSIVVNI 480 CRRLPSENHS LFMEAVPVLC NLLQYEDRQL VESVATCLIK IVDQVSQYQE MLYETCKHGL 540 VNQAVHIISL NARTTLSQAV YNGIIGMLVK LCSGSANAFR TLHELNICGI LKDVLSTGDL 600 SHGVSSPHQA NGHSIQVHEV LKLLNEVVPS SSNSEYMQQI SEKEAFLADN PVFIRRLGME 660 MLPLLIQMVN SGANLYVCFC CLSVINNFFA LCTSDILAEV LADTNFSSFL AGVFTRKEQH 720 LLIMALRIAE TCLQKLSDVF LNSFMKEGVC FAIDALLKPE ETSHKMFPTY DGSELLLDPS 780 QRSGFRGVPR CFCYVLDTGQ PSTCETVVCK LEKDAVRRLA MHIRTSYFSP ELCNSGPLTD 840 ILQKLRALSA ALTDLASTSL CDSPAQYEEK FHSILSQIME KLGGREAIST FEFIESGILK 900 SLVRYLSSGL SMHEEVDPQT ESHDLYIVEK RFEVLARLLL SSSKTLDDEL PLMSLTKKLQ 960 RALSSLENFP IILSNSKQRN SYALVPEARY LSHPCFKVRF LKEEGEACLS DSSQDVLTVD 1020 PFSSLDSIER YLYSKVTRKG KRGKKSIKDK EELIPAAIPT DTSLSPGRSP ESDGTPAILP 1080 EEVEGHLLQP TLVQADCERL SGGAGVTSNI DTSGSESKFP KGDDVMTTHS PSSSSDASVL 1140 PKLVLCLEGQ ELDLSDTLYQ AVLQQQMKTE NEIIAGSNLW SEVHTVTYRL AKAKSSSSLA 1200 CSYSSKAEKT GGTHCLSRLF SRKLATDLKR PGAVYDIIIL LKSMHLLHRS SFELLSRERM 1260 SAFSEGRVND LHYLKAAVPY MLQSEFVSSK LTEKLEQQMR DPLISSTGAL APWCIQLMGS 1320 CPFLFSFEVR CKYFQLAAFG RSLAQSCVPS RGSSDGSIDR RRNGGAGLAR KKLLVYRDRI 1380 MASAAEVMDL YASKKEPIEV EFDDEVGTGL GPTLEFYTLV SHEFQKAGHG MWRDDHVLSS 1440 SNGSLHSLGS GILTSSLGVF PCPWSTTLDE SGDAKFAEVI SKFFILGRVV AKALQDGRVL 1500 DFHFSKTFYK LIIGQDLNLF DIHSFDPKLG QTLLEFQALV DKRKFMESVH RENTAYEYGS 1560 CFWNRSFEDL CLDFSLPGYP DYVLSPDANH SMVNMSNLED YVSLVVDATI KTGISRQVEA 1620 FKSGFNEVFP VRHLEIFSEE ELERLLCGEH DSWALNDLLD NIKFDHGYTA SSPPVLNLLE 1680 IVQEFDQEQR RAFLQFVTGA PRLPPGGLAS LKPKLTIVRK HCSKVADEEL PSVMTCANYL 1740 KLPPYSSKEK MREKVLYAIR EGQGSFHLS

Sequence ? help Back to Top

Protein Sequence Length: 1769 aa Download sequence

MAEAPASPGG GGSHDESGDH SPRSHVREQD RYLPIANISR IMKKALPANG KIAKDAKETV  60
QECVSEFISF ITSEASDKCQ REKRKTINGD DLLWAMATLG FEDYIDPLKV YLSRYREGDT  120
KGSAKVGEGS ARKDGVALHH GANAQKLSAE KAGERRRRRR RADEKLTSPL SSIRIPISRL  180
KSSSTASETD YRHTQSEIET DNYINLGSIC SETLPRKKSH TGSSMESRGQ KRADVVDELP  240
ADKRACNLVE FRPSSSNSSA QTQVKSTNSP LHSQEADMET SSTASASSRS EGEPDRDSAY  300
GSCDSDDLDP RYSSLRDYHR RRSFGENSKF KTILSSLSSE KEPSALVAAL TELCEVLSFC  360
TEDSPSSMLA DSFSPILVKL ARHNSNPDIM LLAIRAITYL CDVFPRSSGF LVRHDAIHAL  420
CEKLMAIEYM DVAEQAPLEK ISRDQPLACL QAGAIGAVLN LIDFLSTSMQ RVALSIVVNI  480
CRRLPSENHS LFMEAVPVLC NLLQYEDRQL VESVATCLIK IVDQVSQYQE MLYETCKHGL  540
VNQAVHIISL NARTTLSQAV YNGIIGMLVK LCSGSANAFR TLHELNICGI LKDVLSTGDL  600
SHGVSSPHQA NGHSIQVHEV LKLLNEVVPS SSNSEYMQQI SEKEAFLADN PVFIRRLGME  660
MLPLLIQMVN SGANLYVCFC CLSVINNFFA LCTSDILAEV LADTNFSSFL AGVFTRKEQH  720
LLIMALRIAE TCLQKLSDVF LNSFMKEGVC FAIDALLKPE ETSHKMFPTY DGSELLLDPS  780
QRSGFRGVPR CFCYVLDTGQ PSTCETVVCK LEKDAVRRLA MHIRTSYFSP ELCNSGPLTD  840
ILQKLRALSA ALTDLASTSL CDSPAQYEEK FHSILSQIME KLGGREAIST FEFIESGILK  900
SLVRYLSSGL SMHEEVDPQT ESHDLYIVEK RFEVLARLLL SSSKTLDDEL PLMSLTKKLQ  960
RALSSLENFP IILSNSKQRN SYALVPEARY LSHPCFKVRF LKEEGEACLS DSSQDVLTVD  1020
PFSSLDSIER YLYSKVTRKG KRGKKSIKDK EELIPAAIPT DTSLSPGRSP ESDGTPAILP  1080
EEVEGHLLQP TLVQADCERL SGGAGVTSNI DTSGSESKFP KGDDVMTTHS PSSSSDASVL  1140
PKLVLCLEGQ ELDLSDTLYQ AVLQQQMKTE NEIIAGSNLW SEVHTVTYRL AKAKSSSSLA  1200
CSYSSKAEKT GGTHCLSRLF SRKLATDLKR PGAVYDIIIL LKSMHLLHRS SFELLSRERM  1260
SAFSEGRVND LHYLKAAVPY MLQSEFVSSK LTEKLEQQMR DPLISSTGAL APWCIQLMGS  1320
CPFLFSFEVR CKYFQLAAFG RSLAQSCVPS RGSSDGSIDR RRNGGAGLAR KKLLVYRDRI  1380
MASAAEVMDL YASKKEPIEV EFDDEVGTGL GPTLEFYTLV SHEFQKAGHG MWRDDHVLSS  1440
SNGSLHSLGS GILTSSLGVF PCPWSTTLDE SGDAKFAEVI SKFFILGRVV AKALQDGRVL  1500
DFHFSKTFYK LIIGQDLNLF DIHSFDPKLG QTLLEFQALV DKRKFMESVH RENTAYEYGS  1560
CFWNRSFEDL CLDFSLPGYP DYVLSPDANH SMVNMSNLED YVSLVVDATI KTGISRQVEA  1620
FKSGFNEVFP VRHLEIFSEE ELERLLCGEH DSWALNDLLD NIKFDHGYTA SSPPVLNLLE  1680
IVQEFDQEQR RAFLQFVTGA PRLPPGGLAS LKPKLTIVRK HCSKVADEEL PSVMTCANYL  1740
KLPPYSSKEK MREKVLYAIR EGQGSFHLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	160	RRRRRR
2	155	161	RRRRRRR
3	156	161	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	2e-63	NF-YB family protein