PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81741.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Trihelix
Protein Properties Length: 290aa    MW: 34531.9 Da    PI: 9.1429
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix80.42.5e-2544126186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++ + +r e+++++ ++k++k lWe +s+km+e g++rs++qCk+kw+nl +ryk ++++e +     ++++p++++++
  OWM81741.1  44 QWSVQETKEFLMIRGELDQSFMETKRNKLLWEVISNKMKELGYNRSAEQCKCKWKNLVTRYKGCETMEPEV---MRQQFPFYNEMQ 126
                 7********************************************************************96...45679*****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEGHHSHHHI NPHHHHHRPQ LQPHPQPQHV NVGLVDSPAD RFPQWSVQET KEFLMIRGEL  60
DQSFMETKRN KLLWEVISNK MKELGYNRSA EQCKCKWKNL VTRYKGCETM EPEVMRQQFP  120
FYNEMQTIFA ARMQRMLWAE AEGGASSSKK KASQLSSDEE DENEDSEGEQ KARSSRQKKK  180
KAKSGNMSAA STSSNSSSDK LVKLLEDFMK QQVQMEMQWR EAFEARENER RMREMEWRQT  240
MEALENERIM MDRRWREREE QRRIREDARA EKRDALITAL LNKLRSRGDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.11e-54Trihelix family protein