PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80771.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 570aa    MW: 63278.2 Da    PI: 8.9186
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.8e-1825110899
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 s++++  rl +p kf++ ++gk  +s   +le +sg+ Wev+li++  ++++ l  GW  Fv++n + +gD +vF++dg+  f   v++f++
  OWM80771.1  25 SSASSPERLKIPSKFTRYIEGK--SSGLASLEGPSGNIWEVELIHE--KDSVSLHCGWPTFVRDNSIISGDLLVFRYDGNLHF--SVQIFDE 110
                 7778889*********888888..5558***************555..55588************************997777..9999986 PP
2B353.44.5e-17240333197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 f+ v+++ +v+ s  l +p +f  eh   +++ + ++l++++g++W+v+    +k   ++++ +GW  Fv+ang+k+ D++vF+l+++ e   +v+++
  OWM80771.1 240 FVRVMKKFNVSGSYTLNIPYQFSMEHL--PKCRISIVLRNLKGERWTVNSVPtTKVHTSHTFCGGWMAFVRANGIKVEDICVFELIHKCEL--RVHIL 333
                 667777888999999*******99996..348899**************95557777779999**********************995555..66665 PP
3B344.82.2e-144555321797
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  +p +f  ++   ++++++++l++++g  W+v+    +k++ ++++ +GW +Fv++ng++ gD+++F+l+g  +fe++v++ 
  OWM80771.1 455 KVPHQFSMAYL--PQCKTEIILRNLNGDCWTVNSVPdSKGRLSHTFCGGWLSFVRDNGIQMGDTCIFELVG--RFEMRVHIS 532
                 56777776664..56899****************554555555*************************998..788889885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MGEAGARDRK TMPRGKLPHF YEIYSSASSP ERLKIPSKFT RYIEGKSSGL ASLEGPSGNI  60
WEVELIHEKD SVSLHCGWPT FVRDNSIISG DLLVFRYDGN LHFSVQIFDE TACEKEVAFH  120
AKCSQDPSDY GDGNGDGERG KDEATHCSKD LNKMKLCQIP DDERYWIEDV ITVAKHQTSN  180
LLAEAVIPLR SVACNEKCDM KNGSVKGQEL DLPSSSQILR SSSAEEKKIA RSFTSSFPYF  240
VRVMKKFNVS GSYTLNIPYQ FSMEHLPKCR ISIVLRNLKG ERWTVNSVPT TKVHTSHTFC  300
GGWMAFVRAN GIKVEDICVF ELIHKCELRV HILAGPTCND NERKVSNVSA VISGASSEEE  360
PDGIKRKKRK SMVVNSQVLK KVKKLDKKSL KTSLEGSSSS MKKHTNASKS STVGKASVGT  420
AASLQTNDCL STLLSLHEQK VARSFRSSFP SFVRKVPHQF SMAYLPQCKT EIILRNLNGD  480
CWTVNSVPDS KGRLSHTFCG GWLSFVRDNG IQMGDTCIFE LVGRFEMRVH ISEDGRGAIY  540
TCGFLYTRSG EVRKGGLGFL KVSGLSGPDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1365391KRKKRKSMVVNSQVLKKVKKLDKKSLK
2367393KRKKRKSMVVNSQVLKKVKKLDKKSLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-16B3 family protein