PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM80705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 158aa MW: 17896.1 Da PI: 9.8782 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r++k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g OWM80705.1 35 PYRGIRRRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDIAVFYLRG 84 69****998.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MEIACGGTGV GENKRKRQSV APPPPTHQVQ GQEKPYRGIR RRKWGKWVAE IREPNKRSRI 60 WLGSYTTPVA AARAYDIAVF YLRGPSARLN FPDLVLREED DDRLREVSAA SIRKKAAEVG 120 ARVDAQQNKL HQHDQGSSPT HVLEKPDLNE YPKSEDED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46768.1 | 3e-48 | ERF family protein |