PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80641.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 359aa    MW: 39517.9 Da    PI: 4.5794
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-102853251055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  OWM80641.1 285 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 325
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEPIQSMLGA FPYGDQWDPL SILFNNEDLE MTQRLLGQCP PGLEIPTDCF FTSPEEFPED  60
QTMPAGMCEG FLNPALTPSR NSLMGSSSQD GSYASTGFEG HYYPGMSTFS MEEKYSGESF  120
VPDFTGILAG EGFCQSDNNA AGSDIQAEPV EQQAAVKRLQ PKRGYTGSNS CTAEKDDAET  180
DAPKNLKKRK PCASRSDKGK KNVLPKKKQR LAKPNGDEGE EGNVIVRQQG QSSSTCSSEE  240
DSVSQELNNG ESAQNSNETS ALNSDGKTTR ASKGTATDPQ SLYARRRRER INERLRILQN  300
LVPNGTKVDI STMLEEAVQY VKFLQIQIKL LSSDELWMYA PIAYNGMDIG LNQMLPRHL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184190KNLKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-40bHLH family protein