PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80626.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 414aa MW: 45423.9 Da PI: 6.0157

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.4e-10	258	306	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq OWM80626.1 258 NSHSLAERVRREKISERMRMLQELVPGC----NKITGKAVMLDEIINYVQSLQ 306 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEACDGGDMG FQQVGNAVTN RESNPISQEA SMMAMSSMAM IPKPANVHHD PFFGFGWDPL 60 SSMTQNHQNF GCPPVVPHRD FASFPFPPLP LWENQGIPPH LAHYPPPDSS FIDMVPRAPC 120 FVSRGLSDMV GPVGLPQSGP VANPGPNYAS NVGDSAIEGT RNTEGEAMGS PSTERRRKRT 180 PDSSSPYDPN KNTEGEPRQD HSGDTSDVQK DQNEKKQKIE QTESANSRGK QTKDDSNSQE 240 PPKENYIHVR ARRGQATNSH SLAERVRREK ISERMRMLQE LVPGCNKITG KAVMLDEIIN 300 YVQSLQQQVE FLSMKLATLL PDLSIDLERV LSKEILQARG RDALARGLGP GTGLPLPYSN 360 APGILQGALP STSQYPPLPQ GPLDNELQTL FQMGFDSNSA HDLLKQNGRL KPEQ

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEACDGGDMG FQQVGNAVTN RESNPISQEA SMMAMSSMAM IPKPANVHHD PFFGFGWDPL  60
SSMTQNHQNF GCPPVVPHRD FASFPFPPLP LWENQGIPPH LAHYPPPDSS FIDMVPRAPC  120
FVSRGLSDMV GPVGLPQSGP VANPGPNYAS NVGDSAIEGT RNTEGEAMGS PSTERRRKRT  180
PDSSSPYDPN KNTEGEPRQD HSGDTSDVQK DQNEKKQKIE QTESANSRGK QTKDDSNSQE  240
PPKENYIHVR ARRGQATNSH SLAERVRREK ISERMRMLQE LVPGCNKITG KAVMLDEIIN  300
YVQSLQQQVE FLSMKLATLL PDLSIDLERV LSKEILQARG RDALARGLGP GTGLPLPYSN  360
APGILQGALP STSQYPPLPQ GPLDNELQTL FQMGFDSNSA HDLLKQNGRL KPEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-72	bHLH family protein