PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM80338.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family BBR-BPC
Protein Properties Length: 311aa    MW: 34774.3 Da    PI: 10.1049
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM80338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind313.95.2e-9613111301
   GAGA_bind   1 mdddgsrernkg.yye............paaslke.nlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllall 85 
                 mdd     r+k  yy+            +a++++  +++ ++m+++a++d++irern+a+ e+k+a+ +rd+a +q ++a  er+kal+erd++ +al+
  OWM80338.1   1 MDDAK--GRQKMdYYKgmppswnipsqqQAKAFNAlDMNRKIMAILADKDNAIRERNVAINETKEALRARDEAIKQTNQAYVERDKALMERDSAKAALQ 97 
                 56553..367766999999999999875335554326999*********************************************************** PP

   GAGA_bind  86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak..kkkkksekskkkvkkes 182
                 +  n +++ + +g +  +g k ++ +   s ++ ++s+v+l+e    +  + ++ + +   + k+ +++rak+ k + a+  k kk +  +  +  ++ 
  OWM80338.1  98 YFVNDISNYSTAGGNQQRGMKRAHPSVSPSYSHSHPSQVDLPEAF-ADMDEAHQ-QVTDGSSGKPGRTKRAKQSKGNSARgsKGKKVG--EDLNMWAPP 192
                 *****9999999999999999999777666677777777765554.34444333.334445556666677777777666622444444..434444555 PP

   GAGA_bind 183 aderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                  ++r++++++s + +ln v+++ s +PvPvCsCtG++r CYkWGnGGWqS+CCtttiS+yPLP+ +++r+aR++grKmS+++f+klL++La+eG+dls 
  OWM80338.1 193 LEKRVRSKWDSREEGLNLVNYNGSIMPVPVCSCTGVPRHCYKWGNGGWQSSCCTTTISMYPLPQIPNKRHARVGGRKMSGSVFSKLLSRLAEEGHDLSV 291
                 568************************************************************************************************ PP

   GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                 p+DLkd+WAkHGtn+++ti+
  OWM80338.1 292 PLDLKDYWAKHGTNRYITIK 311
                 *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDDAKGRQKM DYYKGMPPSW NIPSQQQAKA FNALDMNRKI MAILADKDNA IRERNVAINE  60
TKEALRARDE AIKQTNQAYV ERDKALMERD SAKAALQYFV NDISNYSTAG GNQQRGMKRA  120
HPSVSPSYSH SHPSQVDLPE AFADMDEAHQ QVTDGSSGKP GRTKRAKQSK GNSARGSKGK  180
KVGEDLNMWA PPLEKRVRSK WDSREEGLNL VNYNGSIMPV PVCSCTGVPR HCYKWGNGGW  240
QSSCCTTTIS MYPLPQIPNK RHARVGGRKM SGSVFSKLLS RLAEEGHDLS VPLDLKDYWA  300
KHGTNRYITI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-107BBR-BPC family protein