PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM80186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | YABBY | ||||||||
Protein Properties | Length: 224aa MW: 24736.3 Da PI: 8.4035 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 230.3 | 4.9e-71 | 16 | 188 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas......qllaaeshldeslkee..lleelkveeenlksnvekeesa 92 d+ s ++q+ yv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++ ++ + ++l++++ + llee ++ ++ +n++ + OWM80186.1 16 DHLSPTDQLRYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCANLLSVNMRGLLlpspaaTAATQLQQLGHTFFAPhnLLEEIRNVPPTVLMNHHF---P 111 78899*******************************************99887444322333333444444433223444444444444433333...3 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + +s+ + + +e +pr+ v+rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl OWM80186.1 112 NPAESVLQ-LHGGSEPIPRPALVNRPPEKRQRVPSAYNRFIKEEIQRIKAQNPDISHREAFSAAAKNWAHFPHIHFGL 188 33333333.3567889***999******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MMSSSSSSSS SSLSPDHLSP TDQLRYVHCN FCDTVLAVSV PCSSLFKTVT VRCGHCANLL 60 SVNMRGLLLP SPAATAATQL QQLGHTFFAP HNLLEEIRNV PPTVLMNHHF PNPAESVLQL 120 HGGSEPIPRP ALVNRPPEKR QRVPSAYNRF IKEEIQRIKA QNPDISHREA FSAAAKNWAH 180 FPHIHFGLMP EQSVKKPTMC QQEGEDMLRK DGLFAPANLG VSPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-82 | YABBY family protein |