PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79904.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 212aa MW: 24208.4 Da PI: 9.5597

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.8	6e-19	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++a++ G ++Wk+Ia+ g++R++k+c++rw +yl OWM79904.1 16 KGAWTVEEDQKLAEAIAVNGARRWKKIAAIAGLNRCGKSCRLRWMNYL 63 79********************************************97 PP
2	Myb_DNA-binding	50.6	4.3e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l OWM79904.1 69 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 114 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MDSSVTDLQR KKRINKGAWT VEEDQKLAEA IAVNGARRWK KIAAIAGLNR CGKSCRLRWM 60 NYLRPNIKRG NISDQEEDLI LRLHKLLGNR WSLIAGRLPG RTDNEIKNYW NSHLRKKINH 120 QKKESRVPGV RNAMAIVPDK KAYAEAVATE KTSGGGEDPG TGFDVDEFFN FSMENCSDLD 180 WIGSVLSDDR GALLQDEFNG YLDKINFSEY RY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	7e-53	MYB family protein