PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB_related | ||||||||
Protein Properties | Length: 176aa MW: 20110.4 Da PI: 9.9911 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 27 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l OWM79903.1 27 RGNITDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 72 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MAQRGFNRCG KSCRLRWLNY LRPNIKRGNI TDQEEDLILR LHKLLGNRWS LIAGRLPGRT 60 DNEIKNYWNS HLSKKINPKQ KPGPAPRKGT SIVEKAPQLA DSNKANMYHI QAIKDRSTAT 120 DGTTTSEGEH SSSKQSTPSF DINGADDDFF DFSNESPLNL EWVSRFLEFD SRHHQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G40330.1 | 2e-42 | MYB family protein |