PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79790.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 213aa    MW: 23257.9 Da    PI: 8.9732
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.8e-203282155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr ++ +gr++AeIrdp   gk++r++lg++++ae+Aa+a+++a+++l+g
  OWM79790.1 32 TRFRGVRKRP-WGRFAAEIRDP---GKKTRVWLGTYDSAEDAARAYDEAARSLRG 82
                589*******.**********8...557*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MPRGRSNQKS VNPAALPDSS AAVRPRAAQI ETRFRGVRKR PWGRFAAEIR DPGKKTRVWL  60
GTYDSAEDAA RAYDEAARSL RGPKAKTNFP IDGESSGLLI RALPGDRLPY SRPTSSSLSS  120
TVESFSGPRV SDRAVPAAPP RESSRRSRRP PPAREIRPED CQSDCDSSSS VVDDVDDCCV  180
LTSSFQQNVL PFDLNLPPPD LDGLDLPDTA LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-22ERF family protein