PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79620.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 350aa    MW: 37633.2 Da    PI: 6.1758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13110161155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r +h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  OWM79620.1 110 QRISHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 161
                 699**************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGDTTNIFDE HHEFADTTGF GTGPASPDDL FSIFESLDAE LAQLDAANHQ VGDLGSGLGL  60
GGGQWSSSHV GHESETEAEG AAGGTSSPRS CKRPRAVADS SDVEKEDGQQ RISHITVERN  120
RRKQMNEHLS VLRSLMPCFY VKRGDQASII GGVVDYINEL QQILQSLEAK KQRKVYSETV  180
LSPRPVLSPR PSPLSPRSKP PLSPRSKPPL SPRLNLPVSP RTPQPTSPYR PRLMQPAAAA  240
SGGGSCYSSA LSSPSPTSSS SSSINENLNE LAANSKSSIA DVEVKFSGAN LLLKTVSSRI  300
PGQITKIIAV LEELSLEILQ VNINSVDETM VNSFTIKVSD LNLTFIWLLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.13e-76bHLH family protein