PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79616.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 327aa    MW: 36477.5 Da    PI: 4.6089
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.5e-20106156256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +++GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa+ +++a++kl+g+
  OWM79616.1 106 KFRGVRQRP-WGKWAAEIRDPE----RrVRLWLGTYETAEEAARVYDNAALKLRGP 156
                 89*******.**********72....34**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MEQSDCFRPV KYTEQRTLTT KFTESRPAGP RVLRVSVTDP DATDSSSDEE TEPCFRQRQR  60
VKRYISEIRI EEGCRAHAVR EGRMRAPVAG VAKRPSRAQP SAGERKFRGV RQRPWGKWAA  120
EIRDPERRVR LWLGTYETAE EAARVYDNAA LKLRGPHALT NFSTPSALEK TEEHNAVSVS  180
MVNVNATSPV SSYDSTEVSS QSQQARELSS PTSVLRFDGR HSADREQKPV LKMEPPDEPA  240
EDFQGETGLT EYLPADFPPV DDFFDFAAAA SMFGDSAGLP DPMIDGDLCD FLLDSPSDLG  300
PLPMDLQVND YFQDIGDLFP SDPLSVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-53ERF family protein