PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25503.3 Da PI: 4.767 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.3e-18 | 58 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+e+r+p +k++r++lg+f ae+Aa+a++ a+++l+g OWM79505.1 58 PVYRGVRRRD-SGKWVCEVREP---NKKTRIWLGTFQNAEMAARAHDVAALALKG 108 68*****999.7******9998...347************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MDVFSSLSDP NSYGSPLSDG GSSRPRNFSD DNEAEVLLAS ENPKKRAGRK KFREMRHPVY 60 RGVRRRDSGK WVCEVREPNK KTRIWLGTFQ NAEMAARAHD VAALALKGRR SACINFADSA 120 WRLPVPDSAD PKDIRKAAAD AAEAFRPMEA SDGALSSEEM GNETKEVVSS VVEERSSISD 180 MDEKASAFSM PELLADMAAE GLLPPLQSNG DGYMEDEEGD INAYVSLWSH SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 1e-48 | ERF family protein |