PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26516.6 Da PI: 8.4117 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.3 | 2.1e-19 | 110 | 160 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp ng +r++lg++ taeeAa a+++a+ +++g OWM79429.1 110 HFRGVRQRP-WGKFAAEIRDPARNG--TRVWLGTYETAEEAALAYDRAAFRMRG 160 69*******.**********97676..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MISSFTALFP CLTDTWGDLP LQVDDPDDML IYNSLHDAVS SGWSPLMTST THSDYSSSAP 60 WPVDPTYYYN EYSTTDERLI VEEIGRRSPA VPGKRSPGGN SSSSASRGRH FRGVRQRPWG 120 KFAAEIRDPA RNGTRVWLGT YETAEEAALA YDRAAFRMRG SKALLNFPHR INSGEPAPVR 180 VTASKRKEQE PSSGSSSSGS APKKKNKKFA APESTVKEAE EAGFIMLQAV AQLPLGEQLL 240 VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 1e-40 | ERF family protein |