PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26939.1 Da PI: 4.8363 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 5e-20 | 95 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r r++lg+f taeeAa+a+++a+ +++g OWM79225.1 95 QYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFVTAEEAARAYDKAAIEFRG 144 6********.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MFSGQPLPAR LAQDQYDELS VIFSACTDTA RLQEYYFPPL QSVPAAVTVP SLICESCRIE 60 GCLGCEFFPQ HIPAAEAEEE GTGSKKRKRR QRKNQYRGVR QRPWGKWAAE IRDPRRAVRV 120 WLGTFVTAEE AARAYDKAAI EFRGARAKLN FPNTEYYSLK PRSDVDETRS SSAGEDNGVE 180 VSKPVSSGED NGVEVLKPTN MMEKSGAGLG EQGVGDFWGI FGGGGDDDGD QELKQLMMLL 240 WSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 90 | KKRKRR |
2 | 85 | 93 | KKRKRRQRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 2e-29 | ERF family protein |