PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78667.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 206aa    MW: 22093.9 Da    PI: 8.8275
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP271.21.8e-222676155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++y+GVr+++ +gr++AeIrdp   g++ r++lg+f+taeeAa+a++aa+++++g
  OWM78667.1 26 PHYRGVRRRP-WGRYAAEIRDP---GRKSRVWLGTFDTAEEAARAYDAAALQYRG 76
                68********.**********8...556*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MAAKAKRGVV NGGAKGAAHA GFVKEPHYRG VRRRPWGRYA AEIRDPGRKS RVWLGTFDTA  60
EEAARAYDAA ALQYRGPKAK INFPLPNGAA EQSPAQSSTE ESSGEADVPY ALPLQLGLAR  120
QAAGNGYMVQ FPFADGSRQG IMARPLFAFE PLVGRPDPMG QVIPVLFRAR SEGEARSELD  180
ASSAVEQPPT GVLLDLDLNL PPPEEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-29ERF family protein