PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78518.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

FAR1

Protein Properties

Length: 803aa MW: 91875 Da PI: 8.3157

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69	1.1e-21	94	170	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn YA +vGF++r+ + ++s+ +g++ +r+fvCskeg++ + +rtgC a ++vkk ++gkw+++++ ++HnHel p OWM78518.1 94 DFYNLYAARVGFKMRIGQLYRSRVDGSVSNRRFVCSKEGFQIN--------------SRTGCPAFIRVKKCDSGKWVIDQFAKDHNHELEP 170 6*************************************865..............589**************************975 PP
2	FAR1	59.5	1.1e-18	237	311	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn +A ++GF+vr+ + +sk +g+it+r+fvCskeg++++ +r+gC a +++k++++g+w+v++ + +HnHel OWM78518.1 237 QFYNVFAMKTGFRVRIGQLFRSKLDGSITSRRFVCSKEGFQHP--------------SRVGCGAFMRIKRQDNGTWVVDRHQMHHNHEL 311 6*************************************999..............4899*************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MGRKRRRKGP TEAADPVNVF GRVLSPDTGR ELGSVQFADF RSLDIDPTSA EMSGKVYPVG 60 VVCTRNIMNG EGGGDAGLEP FVGMEFDSAD DARDFYNLYA ARVGFKMRIG QLYRSRVDGS 120 VSNRRFVCSK EGFQINSRTG CPAFIRVKKC DSGKWVIDQF AKDHNHELEP SGEDQSVILE 180 AKTPLRNNPI VDVPHRPRTK LLDVVNPKRA KIVPDVGQDK IEPCIGLEFN TANEAYQFYN 240 VFAMKTGFRV RIGQLFRSKL DGSITSRRFV CSKEGFQHPS RVGCGAFMRI KRQDNGTWVV 300 DRHQMHHNHE LELQMESSRS LSSKKLVEEI NGGLLDKDET VVASAVRPRK AQHRANNIES 360 DWYNVLLNYF QGKQAEDTGF FYALEIQMGR SRSIFWADGR SRFSCSQFGD AVVFDTSYRS 420 GDYSVPFATF TGINHHKQPV LLGCALIADE SKETFAWLFE TWARAMSGCR PKSIIADQDK 480 AIREAIAQVF PGTHHRFSAW QMKAKENENL GSLSGNFKYE YDRCIYQSQT TGEFDSAWNT 540 LLHKYNLVGN EWLKLMYEYR ENWVPLYLRG TFFAGIPVNG SPDAFFGAFL SAQTPLREFV 600 PRYERALEQR REEERKEDFN SFNLQAFLQT SEPVEEQCRR LYTLAIFKVF QKEILQSYGF 660 LGSKIYEEGP ISRYLVRRGG ATEIEKHIVT FNASDLEASC GCQMFESEGV LCRHVLRLFQ 720 MLDVREIPSR YILHRWTRNA EYGGIARDIE SGISSQEQLK AMMKWSLQEM ASRFVESGIS 780 SYENYKLAYE IMRDGGRKLC WQR

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MGRKRRRKGP TEAADPVNVF GRVLSPDTGR ELGSVQFADF RSLDIDPTSA EMSGKVYPVG  60
VVCTRNIMNG EGGGDAGLEP FVGMEFDSAD DARDFYNLYA ARVGFKMRIG QLYRSRVDGS  120
VSNRRFVCSK EGFQINSRTG CPAFIRVKKC DSGKWVIDQF AKDHNHELEP SGEDQSVILE  180
AKTPLRNNPI VDVPHRPRTK LLDVVNPKRA KIVPDVGQDK IEPCIGLEFN TANEAYQFYN  240
VFAMKTGFRV RIGQLFRSKL DGSITSRRFV CSKEGFQHPS RVGCGAFMRI KRQDNGTWVV  300
DRHQMHHNHE LELQMESSRS LSSKKLVEEI NGGLLDKDET VVASAVRPRK AQHRANNIES  360
DWYNVLLNYF QGKQAEDTGF FYALEIQMGR SRSIFWADGR SRFSCSQFGD AVVFDTSYRS  420
GDYSVPFATF TGINHHKQPV LLGCALIADE SKETFAWLFE TWARAMSGCR PKSIIADQDK  480
AIREAIAQVF PGTHHRFSAW QMKAKENENL GSLSGNFKYE YDRCIYQSQT TGEFDSAWNT  540
LLHKYNLVGN EWLKLMYEYR ENWVPLYLRG TFFAGIPVNG SPDAFFGAFL SAQTPLREFV  600
PRYERALEQR REEERKEDFN SFNLQAFLQT SEPVEEQCRR LYTLAIFKVF QKEILQSYGF  660
LGSKIYEEGP ISRYLVRRGG ATEIEKHIVT FNASDLEASC GCQMFESEGV LCRHVLRLFQ  720
MLDVREIPSR YILHRWTRNA EYGGIARDIE SGISSQEQLK AMMKWSLQEM ASRFVESGIS  780
SYENYKLAYE IMRDGGRKLC WQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	7	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein