PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78112.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 326aa    MW: 35305.8 Da    PI: 6.2771
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.2e-17219253135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  OWM78112.1 219 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 253
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEAPEHFVSG GYYGYGTSGL IPQKPTEQAQ FMVDDLLNFS NEDMAMTGDG FSDNAVANSA  60
ESSGFTAVDS CNSSVSGGEN YFSSSFGSRN FGDTSFSADL CVPNDDVAEL EWLSNFVEDS  120
FSNAHNLQLH FPTLNLGSGP NPPTSDSSQS DPNSQSGSAH SFPEAPLPSK SRSRRSRAAP  180
CDWTTRLLYL SEAKPSKSKP SPDPAAPDDT HQEQVGRRCL HCAAEKTPQW RTGPMGPKTL  240
CNACGVRYKS GRLVPEYRPA ASPTFVSTKH SNSHRKVLEL RRQKDMQRVA QAQQQLLCHR  300
SIMGVSNGGD DCLNNHCSGP SYGHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-68GATA family protein