PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM77289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34847.7 Da PI: 7.4638 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.4 | 1.1e-15 | 13 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEde+l ++k +G g+W+ +++ g++R++k+c++rw++ OWM77289.1 13 RGAWSAEEDEILTYYIKSHGEGQWRDLPQRAGLKRCGKSCRLRWLNC 59 89******************************************996 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.9e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+el+++ +k+lG++ W++Ia++++ gRt++++k++w++ OWM77289.1 66 RGNISEEEEELILRMHKLLGNR-WALIAARLP-GRTDNEIKNYWNTN 110 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MRRPCCAKEG LNRGAWSAEE DEILTYYIKS HGEGQWRDLP QRAGLKRCGK SCRLRWLNCL 60 RPNIKRGNIS EEEEELILRM HKLLGNRWAL IAARLPGRTD NEIKNYWNTN LRKRVRDRER 120 QKFGMQTDNE SGQGRLRIAN SIVSGEAHRV IRTKAVRCTK VLFQPQPLEK EQSHAMLSDV 180 PLTDSGNPLS SSHCPNDKNI DFLVDFGIDD LLAPDIDLVM SSDSLVHADK GIINEHEDVI 240 HVNFPAEEIP CPPTGCARRF VIGGEHFDLN CEIDFNALSS VLRHGCADIC LLNSHSSMFV 300 WIPTVSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 2e-60 | MYB family protein |