PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76507.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 342aa    MW: 36872 Da    PI: 7.005
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.5e-17229263135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  OWM76507.1 229 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 263
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MEVSECCVGV GYCGAGGADF YPEKKAGEQF TVDDLLDFSN EDVMGSGDGG FLDNVGANSA  60
DSSTATAVDS CNSTLSGGDN QFSGSFGSRS FGDSSFSGEL CVPYDDLAEL EWLSNFVEDS  120
FSTKHNLQQP LHIITVPNSK PTTPESSSSD APAAGPEQPS DAAQHHAIFL PETPLPSKSR  180
SKRSRAAPCD WTTRLLHLTP AASAAVKPPK TSALKKQREA QGPTEPRKCL HCASEKTPQW  240
RTGPMGPKTL CNACGVRYKS GRLVPEYRPA ASPTFVSTRH SNSHRKVLEL RRQREMQRVH  300
QHGHHPPHQF VGQSPMFTRP GSNGVDEFLI GHCGGPGFRQ LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.14e-62GATA family protein