PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76426.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 258aa    MW: 27868.9 Da    PI: 5.3726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1873123155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  OWM76426.1  73 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 123
                 68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MPELSNSNSD REAISNSLSS PPSSPSSPTG SSDSSATPKK LSPYAASVRK LASHDADSDP  60
KKAKRARDTS KHPVYRGVRM RNWGKWVSEI REPRKKSRIW LGTFSTPEMA ARAHDVAALS  120
IKGSSAILNF PELAASLPRP ASLSPRDVQA AAAKAAQMNE FDPVSSSSTS SSSSSTLTSS  180
SSLSSLVSAM DLSEESDELS EIIELPSLGM GYDWAHPSTE LVYVDPVDGW MYHPPWLENN  240
ASNDFEDCMR SGFEGLLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-54ERF family protein