PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM76407.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GeBP
Protein Properties Length: 314aa    MW: 35708 Da    PI: 5.3582
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM76407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57370.63.1e-22114203398
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 fqr+wse  e+ +++Gl++  ++   +p+ +++++ye +k++i + vsk+ql++Kir+LKkKfk + kk+k+g e    ++++++ +el+ k+Wgs
  OWM76407.1 114 FQRMWSEPEEMEVMKGLVEVSKN---KPKYELNDIYECIKQKIPSSVSKRQLSSKIRNLKKKFKSRDKKVKEGAE---LSPQEENFLELAVKVWGS 203
                 9******************9544...47889**************************************887777...6789999*********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAPKRSFSDD PPSASSEREV EEEAQEDEEE EDDEEEEEED QEEEQKKQQL QSSDSETESE  60
PGPDRAVKQN DKPVPWEPAE RKKRGAEGIV SNGEAASKRV KTKSNSVAEK KQFFQRMWSE  120
PEEMEVMKGL VEVSKNKPKY ELNDIYECIK QKIPSSVSKR QLSSKIRNLK KKFKSRDKKV  180
KEGAELSPQE ENFLELAVKV WGSVENLVKG RTAAKKPVKG KAAAARGLEG HVGTSVSALS  240
RRLLKGIEDV GGGRSLNEEF VRKKTYLVDE RMRVELDQRW KRLEEQELQL IVERARLIND  300
HAAVICQTRP SLGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.18e-13GeBP family protein