PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75719.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ERF

Protein Properties

Length: 463aa MW: 51430.6 Da PI: 6.6921

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	57.5	3.4e-18	362	412	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrd +ng +r++lg++ taeeAa a+++a+ +++g OWM75719.1 362 HYRGVRKRP-WGKFAAEIRDRAKNG--ARVWLGTYETAEEAALAYDRAAFRMRG 412 7******.******66665..***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MEERATITRQ KCLKKLNLNI PLLSVRRLGS CSHNFEEASS IISRQGLPKS DTSERVPFSW 60 EQAPGKPKAR PDQLRLHEII SADQPPRPKP PPGRWHQQHP TENIVIKEDG ADGGDDQFMI 120 DSCSLDDHNC CSNYNSDDVV RDRFSDAVDT ISLSEAIDIL EKSDRVHELD ASKLKMVEAA 180 GNLSPSFMIN RFLPDANALA VESFCSRPNL HRDYWMITNN GDDEYPLSTW RTFNSSTAPA 240 SATATAPLFL NCFSHYWGDL SLQFDDSEDM LIFNSLHEAL LSGWSPSPAP VDCPSPPPPV 300 VHDHPQAAVA QPPASYSCCS TFDDQNFVAF SQDIINQCPY FQPVDYYGGT AAVAVTAKIE 360 RHYRGVRKRP WGKFAAEIRD RAKNGARVWL GTYETAEEAA LAYDRAAFRM RGSRALLNFP 420 HRIGSNEPEP VRVTAKRKQT GPACGGLART RSKRKPTVSI GGG

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MEERATITRQ KCLKKLNLNI PLLSVRRLGS CSHNFEEASS IISRQGLPKS DTSERVPFSW  60
EQAPGKPKAR PDQLRLHEII SADQPPRPKP PPGRWHQQHP TENIVIKEDG ADGGDDQFMI  120
DSCSLDDHNC CSNYNSDDVV RDRFSDAVDT ISLSEAIDIL EKSDRVHELD ASKLKMVEAA  180
GNLSPSFMIN RFLPDANALA VESFCSRPNL HRDYWMITNN GDDEYPLSTW RTFNSSTAPA  240
SATATAPLFL NCFSHYWGDL SLQFDDSEDM LIFNSLHEAL LSGWSPSPAP VDCPSPPPPV  300
VHDHPQAAVA QPPASYSCCS TFDDQNFVAF SQDIINQCPY FQPVDYYGGT AAVAVTAKIE  360
RHYRGVRKRP WGKFAAEIRD RAKNGARVWL GTYETAEEAA LAYDRAAFRM RGSRALLNFP  420
HRIGSNEPEP VRVTAKRKQT GPACGGLART RSKRKPTVSI GGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	449	454	RTRSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17500.1	7e-36	ERF family protein