PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75661.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 268aa MW: 30255.4 Da PI: 9.4082

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.4e-13	115	167	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ h e+Er+RR+++N+ ++ Lr+llP + ++K + ++ L A +YI++ q OWM75661.1 115 KKTRHREIERQRRKEMNTLYASLRSLLPAQ--ILKGKRTISDQLNVALDYINQIQ 167 6899***********************7..49****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MRRVSFAWVR TTLTQPSNLQ SSCKGFHIAF INIEFNHRLM VNSREGYGFL NSEFEIFVNV 60 ALTRPFVSWP RNAWRSSAQL CPNYSLPKPF VSGQTTNDSN KAREDADGDE ENKKKKTRHR 120 EIERQRRKEM NTLYASLRSL LPAQILKGKR TISDQLNVAL DYINQIQRNI KKLETERARL 180 KKINNELKGD ADAGLGYQEV MSTGSCSISV QPYSSGGVEI VVHSSHEEKP LPLSGVIQVL 240 VDEGMDVVCC ASTQVNDAIV HTIQSKVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	128	KKKKTRHREIERQRRK
2	114	129	KKKKTRHREIERQRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	2e-31	bHLH family protein