PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM75620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 32318.3 Da PI: 7.0324 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.2e-16 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l d++ ++G g+W++++ g+ R +k+c++rw +yl OWM75620.1 19 KGLWSPEEDQRLRDYILRHGHGCWSSVPINAGLQRNGKSCRLRWINYL 66 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.3 | 4.9e-15 | 72 | 117 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T E e ++ +++ lG++ W+ Ia++++ gRt++++k++w++yl OWM75620.1 72 RGMFTVHEGETILSLHRSLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 117 7889******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MSCKTTDQKA TKPKTKHRKG LWSPEEDQRL RDYILRHGHG CWSSVPINAG LQRNGKSCRL 60 RWINYLRPGL KRGMFTVHEG ETILSLHRSL GNKWSQIAQH LPGRTDNEIK NYWHSYLKKR 120 VAKPEPVEPR TKSECKSADA MDSSSFQEPR HKPSSNPPRA TDLSSLPQSI LFAGWLTLDN 180 NTNENANERS FSDYYLHYAD TDLMRMICED CTDCSANLLQ DSLLQNVILG NVDNGAFGGG 240 ELIDCSYKME DQSSESGFLL DFMSTDYIYS SDMHTMNSDL MYM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 8e-62 | MYB family protein |