PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75571.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 342aa    MW: 37722.7 Da    PI: 4.5432
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19117167155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  OWM75571.1 117 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 167
                 59********.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MDRSILCPIK YTEHRTLSKK LTKTQKSSGP RNPPLPRTVR ISVTDPDATD SSSDEEADPF  60
FCRRRVKRYV SEISIETSCK TAPTPSSRKR SSSSIGESPA ATSRKPLKVP SADGNGKKFR  120
GVRQRPWGKW AAEIRDPARR VRLWLGTYDT AEEAAMVYDN AAIKLRGPDA LTNFVTPPSK  180
DKASEGVNVD VSVKVNVSDP SVSGYDSGEE SHNLSSPTSV LQFRTQSSSD DAEPVHEPSQ  240
SKTVEEVQEC QGETSLSESA EFLQLDLPPF MDDFFNFQPP DCTLFDDSGA LHSSLQSEDY  300
FSDLFLETLP DDFPSLCIDT CPVDDYFQDI GDLFASDALA VP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-51ERF family protein