PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75136.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 262aa MW: 29375.7 Da PI: 7.5777

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103	1.7e-32	188	246	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ OWM75136.1 188 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS 246 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MEGDHHHHPH HPHHHHHHRN YELQVSFFST SNTQNEDDST GNNNNNNNNN SSGGNPHTIT 60 EIGFIPFEES HVLGFLAPPP PQSTSHLGGS GATPSSVGLS HQGGSSSGDA AMTRSSNWNS 120 DHQVVGTVDP NSKAAHNETC SGNAPHDPNS SSSWWRSAST TDKGKMKVRR KLREPRFCFQ 180 TRSDIDVLDD GYKWRKYGQK VVKNSLHPRS YYRCTHNNCR VKKRVERLSE DCRMVITTYE 240 GRHNHSPCDD SNSSEHECFS SF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	173	KVRRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	2e-64	WRKY family protein