PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75015.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

DBB

Protein Properties

Length: 343aa MW: 37026.5 Da PI: 6.7172

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.6e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e+ lfC+ ++ +C+ C H+ H+ OWM75015.1 4 QCDVCGKDEAALFCTADEAAICRGCDHRVHHAnklasqHQ 43 7****99****************9964446666666 PP
2	zf-B_box	19.9	1.6e-06	86	115	11	38
zf-B_box 11 ekelqlfCedCqqllCedClleeHkg..Ht 38 ek++ lfC++++ lC dC + +H Ht OWM75015.1 86 EKRAFLFCQQDRAILCWDCDVPIHTAneHT 115 677889*****************9546665 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MKIQCDVCGK DEAALFCTAD EAAICRGCDH RVHHANKLAS QHQRFSLLSP SAKDFPLCDI 60 CQVIITIYLT LFFSSSGSWL QNTPPEKRAF LFCQQDRAIL CWDCDVPIHT ANEHTQKHNR 120 FLLTGVKLSA TSTLYSAAAG PPASLGFDTV PEFPAEALSV KKPPASASSS QQLPPPTKSA 180 RTAASVTSPA AIPKVGNSNN PGSVAASQGN GSTSSISEYL IEMLPGWHFE DFLDSCSASF 240 GFCKSGDDRD GLLPLVDGDD KTTSSSMSSE SLGIWVPQAP NPLPHAAPTI DQFAAQINGF 300 KDAAVAMKHN SNNSNYRWSD DSFAVPQIRP LSSGWKRSRQ HFY

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MKIQCDVCGK DEAALFCTAD EAAICRGCDH RVHHANKLAS QHQRFSLLSP SAKDFPLCDI  60
CQVIITIYLT LFFSSSGSWL QNTPPEKRAF LFCQQDRAIL CWDCDVPIHT ANEHTQKHNR  120
FLLTGVKLSA TSTLYSAAAG PPASLGFDTV PEFPAEALSV KKPPASASSS QQLPPPTKSA  180
RTAASVTSPA AIPKVGNSNN PGSVAASQGN GSTSSISEYL IEMLPGWHFE DFLDSCSASF  240
GFCKSGDDRD GLLPLVDGDD KTTSSSMSSE SLGIWVPQAP NPLPHAAPTI DQFAAQINGF  300
KDAAVAMKHN SNNSNYRWSD DSFAVPQIRP LSSGWKRSRQ HFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	8e-74	DBB family protein