PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73666.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 332aa MW: 37618.7 Da PI: 8.3264

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.3e-05	169	188	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ OWM73666.1 169 FACNICSKTFNRFNNMQMHM 188 78*****************9 PP
2	zf-C2H2	16.3	2.8e-05	253	275	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +CgksF k + ++H +++ OWM73666.1 253 FACRKCGKSFAVKGDWRTHEKNC 275 78*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGLLRDQYLI DINKDLSSPQ TPSNFIEWLK PPIFSSYSSS SSSSSSSLIE QAAHETIQCL 60 PLLSSFNEAK KPPLKEEDNS IFGGDDEKKL LTVDLNIGLP NYYAAPLHHQ QVPRKAEVLD 120 ELKAEHPEAP DCKKIRPLVH EYGYSFGSDQ QKRFWIPTPA QILVGPMQFA CNICSKTFNR 180 FNNMQMHMWG HGSEYRKGPD SLKGAQPAAM LRLPCYCCAQ GCKNNINHPR AKPLKDFRTL 240 QTHYKRKHGA KPFACRKCGK SFAVKGDWRT HEKNCGKLWY CTCGSDFKHK RSLKDHIRSF 300 GKGHSPHPSL EGFESFDHDE KECITGGSEE DE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-118	C2H2 family protein