PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73483.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 398aa    MW: 43881.1 Da    PI: 6.3843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.8e-13334379655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR +i +++ +L++l+P+     +k  + a++L +AveYIk+Lq
  OWM73483.1 334 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVEYIKDLQ 379
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MESDLQQQQQ MLFHSHQPPA MNPGLTRFRS APSSLFASLF DRDFGEDFLN RPSSPETERI  60
LSRLISGTMD DPPPPPMPAA QNLGNFQRNS PPRNDAAALR PPLARPVKSE VDVVQQSNFS  120
SVPSQGYYQS SAQPPLPTNR ITNFGSAPKV GRGNNSSNLI RQNSSPAGLF SNIEIDTGYA  180
TMRGMRGNLG AGSMETSLPP ASRFGNNQDS LTRVASMSPI AEMGDKRMGD NIEEVDPFGE  240
SSNFVTDFPI TSWDDSENYG SLKRGRDEDE KNFSGLNATE ALNEDVRSSQ PQMLAHHLSL  300
PKTSAEMAAI EKFLQDSVPC KIRAKRGCAT HPRSIAERVR RTKISERMRK LQDLVPNMDK  360
QTNTADMLDL AVEYIKDLQQ QVKVGAFSST LITMNQSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.12e-72bHLH family protein