PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73436.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 408aa    MW: 45555.7 Da    PI: 10.5346
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.6e-19247283135
        GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs  nC+tt+Tp+WRrgp g+ktLCnaCG++yrk+++
  OWM73436.1 247 CSnyNCNTTDTPMWRRGPFGPKTLCNACGIKYRKEEE 283
                 55559*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MNSNWLQGKM KKIDEEVDGM GKSSAGMDLT LRLGLPEENN VNVRSNPIGL MRNSRGNPIG  60
PVRVPRTAPM AAPYQLPNFT ALNCPDQMNV APCNSGLMRD KSLEAGAPFF PQRTGERNIG  120
GRPRESHLFP RPNPAGHGGG LANFPATSTI SSPSPPPSSA GYNYNYQNPS YARFPASPAA  180
PMNGNNGFPM STARKYLEEV MVDSSGAPPG NSIANNNTSY MYNGRNSSMP RRGLGSNAPV  240
QNPIKRCSNY NCNTTDTPMW RRGPFGPKTL CNACGIKYRK EEEKQKVKTA RALGNSRAGR  300
WNHLANQGKT EDALFHPLRM LNSKTRGRYC LESFSRRLTP TRVGKPNRLM ISKKYAVKHF  360
PCIRESWDGH EGRENYVDDT KLVFQERLMK VWKFRYCHWR ASHSMFAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.11e-18RAV family protein